Cluster: HRGMv2_3228_CGC21
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: host glycan/beta-glucan
- Genome ID: HRGMv2_3228
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3228_4 | HRGMv2_3228_4_55 | 64882 | 65196 | - | 4.A.3.2.2 |
| pfam | HRGMv2_3228_4 | HRGMv2_3228_4_56 | 65217 | 66119 | - | ROK |
| CAZyme | HRGMv2_3228_4 | HRGMv2_3228_4_57 | 66109 | 67497 | - | GH1 |
| TC | HRGMv2_3228_4 | HRGMv2_3228_4_58 | 67608 | 68930 | - | 4.A.3.2.2 |
| TC | HRGMv2_3228_4 | HRGMv2_3228_4_59 | 69149 | 69457 | - | 4.A.3.2.8 |
Gene ID: HRGMv2_3228_4_55
Type: TC
Location: 64882 - 65196 (-)
Type: TC
Location: 64882 - 65196 (-)
Gene ID: HRGMv2_3228_4_56
Type: pfam
Location: 65217 - 66119 (-)
Type: pfam
Location: 65217 - 66119 (-)
Gene ID: HRGMv2_3228_4_57
Type: CAZyme
Location: 66109 - 67497 (-)
Type: CAZyme
Location: 66109 - 67497 (-)
Gene ID: HRGMv2_3228_4_58
Type: TC
Location: 67608 - 68930 (-)
Type: TC
Location: 67608 - 68930 (-)
Gene ID: HRGMv2_3228_4_59
Type: TC
Location: 69149 - 69457 (-)
Type: TC
Location: 69149 - 69457 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Intestinibacter
Species
Intestinibacter bartlettii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.