Cluster: HRGMv2_3228_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3228
- CGC Family ID: CGCFAM_00090
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3228_3 | HRGMv2_3228_3_133 | 117125 | 119026 | + | 4.A.1.2.9 |
| CAZyme | HRGMv2_3228_3 | HRGMv2_3228_3_134 | 119043 | 120479 | + | GH32 |
| STP | HRGMv2_3228_3 | HRGMv2_3228_3_135 | 120563 | 121525 | + | PfkB |
| pfam | HRGMv2_3228_3 | HRGMv2_3228_3_136 | 121741 | 122703 | + | UvdE |
| CAZyme | HRGMv2_3228_3 | HRGMv2_3228_3_137 | 122830 | 124551 | - | GH3 |
Gene ID: HRGMv2_3228_3_133
Type: TC
Location: 117125 - 119026 (+)
Type: TC
Location: 117125 - 119026 (+)
Gene ID: HRGMv2_3228_3_134
Type: CAZyme
Location: 119043 - 120479 (+)
Type: CAZyme
Location: 119043 - 120479 (+)
Gene ID: HRGMv2_3228_3_135
Type: STP
Location: 120563 - 121525 (+)
Type: STP
Location: 120563 - 121525 (+)
Gene ID: HRGMv2_3228_3_136
Type: pfam
Location: 121741 - 122703 (+)
Type: pfam
Location: 121741 - 122703 (+)
Gene ID: HRGMv2_3228_3_137
Type: CAZyme
Location: 122830 - 124551 (-)
Type: CAZyme
Location: 122830 - 124551 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Intestinibacter
Species
Intestinibacter bartlettii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.