Cluster: HRGMv2_3228_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3228
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3228_3 | HRGMv2_3228_3_43 | 40936 | 43176 | + | GH2 |
| TC | HRGMv2_3228_3 | HRGMv2_3228_3_44 | 43396 | 44454 | + | 3.A.1.11.8 |
| STP | HRGMv2_3228_3 | HRGMv2_3228_3_45 | 44534 | 45781 | - | Pyr_redox_2 |
| pfam | HRGMv2_3228_3 | HRGMv2_3228_3_46 | 45976 | 47475 | - | SelO |
| TC | HRGMv2_3228_3 | HRGMv2_3228_3_47 | 47772 | 49160 | + | 2.A.3.8.12 |
Gene ID: HRGMv2_3228_3_43
Type: CAZyme
Location: 40936 - 43176 (+)
Type: CAZyme
Location: 40936 - 43176 (+)
Gene ID: HRGMv2_3228_3_44
Type: TC
Location: 43396 - 44454 (+)
Type: TC
Location: 43396 - 44454 (+)
Gene ID: HRGMv2_3228_3_45
Type: STP
Location: 44534 - 45781 (-)
Type: STP
Location: 44534 - 45781 (-)
Gene ID: HRGMv2_3228_3_46
Type: pfam
Location: 45976 - 47475 (-)
Type: pfam
Location: 45976 - 47475 (-)
Gene ID: HRGMv2_3228_3_47
Type: TC
Location: 47772 - 49160 (+)
Type: TC
Location: 47772 - 49160 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Intestinibacter
Species
Intestinibacter bartlettii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3228_3_43 | vegetarian > omnivore | 1.55652 | 0.01416 |