Cluster: HRGMv2_3228_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3228
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3228_1 | HRGMv2_3228_1_1220 | 1290434 | 1291381 | + | 2.A.7.3.12 |
| pfam | HRGMv2_3228_1 | HRGMv2_3228_1_1221 | 1291493 | 1292470 | - | CAP |
| TF | HRGMv2_3228_1 | HRGMv2_3228_1_1222 | 1292742 | 1293479 | - | LytTR |
| TC | HRGMv2_3228_1 | HRGMv2_3228_1_1223 | 1293485 | 1294681 | - | 9.B.33.1.2 |
| CAZyme | HRGMv2_3228_1 | HRGMv2_3228_1_1224 | 1294813 | 1296204 | - | AA4 |
Gene ID: HRGMv2_3228_1_1220
Type: TC
Location: 1290434 - 1291381 (+)
Type: TC
Location: 1290434 - 1291381 (+)
Gene ID: HRGMv2_3228_1_1221
Type: pfam
Location: 1291493 - 1292470 (-)
Type: pfam
Location: 1291493 - 1292470 (-)
Gene ID: HRGMv2_3228_1_1222
Type: TF
Location: 1292742 - 1293479 (-)
Type: TF
Location: 1292742 - 1293479 (-)
Gene ID: HRGMv2_3228_1_1223
Type: TC
Location: 1293485 - 1294681 (-)
Type: TC
Location: 1293485 - 1294681 (-)
Gene ID: HRGMv2_3228_1_1224
Type: CAZyme
Location: 1294813 - 1296204 (-)
Type: CAZyme
Location: 1294813 - 1296204 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Intestinibacter
Species
Intestinibacter bartlettii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.