Cluster: HRGMv2_3226_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3226
- CGC Family ID: CGCFAM_03957
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3226_48 | HRGMv2_3226_48_61 | 61464 | 62594 | - | GH3 |
| TC | HRGMv2_3226_48 | HRGMv2_3226_48_62 | 62621 | 63262 | - | 3.A.1.25.5 |
| pfam | HRGMv2_3226_48 | HRGMv2_3226_48_63 | 63469 | 64347 | + | DHDPS |
| TF | HRGMv2_3226_48 | HRGMv2_3226_48_64 | 64526 | 64963 | + | MarR |
| TC | HRGMv2_3226_48 | HRGMv2_3226_48_65 | 64960 | 66699 | + | 3.A.1.135.7 |
| TC | HRGMv2_3226_48 | HRGMv2_3226_48_66 | 66699 | 68528 | + | 3.A.1.135.6 |
Gene ID: HRGMv2_3226_48_61
Type: CAZyme
Location: 61464 - 62594 (-)
Type: CAZyme
Location: 61464 - 62594 (-)
Gene ID: HRGMv2_3226_48_62
Type: TC
Location: 62621 - 63262 (-)
Type: TC
Location: 62621 - 63262 (-)
Gene ID: HRGMv2_3226_48_63
Type: pfam
Location: 63469 - 64347 (+)
Type: pfam
Location: 63469 - 64347 (+)
Gene ID: HRGMv2_3226_48_64
Type: TF
Location: 64526 - 64963 (+)
Type: TF
Location: 64526 - 64963 (+)
Gene ID: HRGMv2_3226_48_65
Type: TC
Location: 64960 - 66699 (+)
Type: TC
Location: 64960 - 66699 (+)
Gene ID: HRGMv2_3226_48_66
Type: TC
Location: 66699 - 68528 (+)
Type: TC
Location: 66699 - 68528 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Lentihominibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.