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Cluster: HRGMv2_3226_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3226_42 HRGMv2_3226_42_38 40265 41599 - 2.A.66.1.37
TF HRGMv2_3226_42 HRGMv2_3226_42_39 41679 42530 + MerR
STP HRGMv2_3226_42 HRGMv2_3226_42_40 43071 46583 - Fer4 | Fer4 | Pyr_redox_2
TC HRGMv2_3226_42 HRGMv2_3226_42_41 46600 48348 - 3.D.1.5.1
TC HRGMv2_3226_42 HRGMv2_3226_42_42 48360 48878 - 3.D.1.5.1
pfam HRGMv2_3226_42 HRGMv2_3226_42_43 48998 50068 - DNA_pol3_delta | DNA_pol3_delta_C
TC HRGMv2_3226_42 HRGMv2_3226_42_44 50084 52465 - 3.A.11.1.3
CAZyme HRGMv2_3226_42 HRGMv2_3226_42_45 52629 55562 + GT51
pfam HRGMv2_3226_42 HRGMv2_3226_42_46 55657 56010 - SpoVAC_SpoVAEB
TC HRGMv2_3226_42 HRGMv2_3226_42_47 56027 57100 - 9.A.11.1.1
TC HRGMv2_3226_42 HRGMv2_3226_42_48 57110 57646 - 9.A.11.1.1
Gene ID: HRGMv2_3226_42_38
Type: TC
Location: 40265 - 41599 (-)
Gene ID: HRGMv2_3226_42_39
Type: TF
Location: 41679 - 42530 (+)
Gene ID: HRGMv2_3226_42_40
Type: STP
Location: 43071 - 46583 (-)
Gene ID: HRGMv2_3226_42_41
Type: TC
Location: 46600 - 48348 (-)
Gene ID: HRGMv2_3226_42_42
Type: TC
Location: 48360 - 48878 (-)
Gene ID: HRGMv2_3226_42_43
Type: pfam
Location: 48998 - 50068 (-)
Gene ID: HRGMv2_3226_42_44
Type: TC
Location: 50084 - 52465 (-)
Gene ID: HRGMv2_3226_42_45
Type: CAZyme
Location: 52629 - 55562 (+)
Gene ID: HRGMv2_3226_42_46
Type: pfam
Location: 55657 - 56010 (-)
Gene ID: HRGMv2_3226_42_47
Type: TC
Location: 56027 - 57100 (-)
Gene ID: HRGMv2_3226_42_48
Type: TC
Location: 57110 - 57646 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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