Cluster: HRGMv2_3226_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3226
- CGC Family ID: CGCFAM_06210
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3226_37 | HRGMv2_3226_37_36 | 37366 | 39861 | - | 2.A.6.4.2 |
| pfam | HRGMv2_3226_37 | HRGMv2_3226_37_37 | 39975 | 40340 | - | DUF3792 |
| pfam | HRGMv2_3226_37 | HRGMv2_3226_37_38 | 40653 | 41201 | - | YajC |
| CAZyme | HRGMv2_3226_37 | HRGMv2_3226_37_39 | 41466 | 42266 | - | GH25 |
| pfam | HRGMv2_3226_37 | HRGMv2_3226_37_40 | 42454 | 43008 | - | DUF5684 | DUF5684 |
| TC | HRGMv2_3226_37 | HRGMv2_3226_37_41 | 43154 | 44878 | - | 2.A.3.8.12 |
Gene ID: HRGMv2_3226_37_36
Type: TC
Location: 37366 - 39861 (-)
Type: TC
Location: 37366 - 39861 (-)
Gene ID: HRGMv2_3226_37_37
Type: pfam
Location: 39975 - 40340 (-)
Type: pfam
Location: 39975 - 40340 (-)
Gene ID: HRGMv2_3226_37_38
Type: pfam
Location: 40653 - 41201 (-)
Type: pfam
Location: 40653 - 41201 (-)
Gene ID: HRGMv2_3226_37_39
Type: CAZyme
Location: 41466 - 42266 (-)
Type: CAZyme
Location: 41466 - 42266 (-)
Gene ID: HRGMv2_3226_37_40
Type: pfam
Location: 42454 - 43008 (-)
Type: pfam
Location: 42454 - 43008 (-)
Gene ID: HRGMv2_3226_37_41
Type: TC
Location: 43154 - 44878 (-)
Type: TC
Location: 43154 - 44878 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Lentihominibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.