Cluster: HRGMv2_3226_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3226
- CGC Family ID: CGCFAM_02722
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3226_24 | HRGMv2_3226_24_16 | 16286 | 17167 | + | CE1 |
| NULL(UNKNOWN) | HRGMv2_3226_24 | HRGMv2_3226_24_17 | 17550 | 18098 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3226_24 | HRGMv2_3226_24_18 | 18298 | 19170 | + | PBP_like_2 | PBP_like_2 |
| TC | HRGMv2_3226_24 | HRGMv2_3226_24_19 | 19232 | 20080 | + | 3.A.1.7.5 |
| TC | HRGMv2_3226_24 | HRGMv2_3226_24_20 | 20080 | 20946 | + | 3.A.1.7.5 |
| TC | HRGMv2_3226_24 | HRGMv2_3226_24_21 | 20951 | 21700 | + | 3.A.1.7.5 |
Gene ID: HRGMv2_3226_24_16
Type: CAZyme
Location: 16286 - 17167 (+)
Type: CAZyme
Location: 16286 - 17167 (+)
Gene ID: HRGMv2_3226_24_17
Type:
Location: 17550 - 18098 (+)
Type:
Location: 17550 - 18098 (+)
Gene ID: HRGMv2_3226_24_18
Type: pfam
Location: 18298 - 19170 (+)
Type: pfam
Location: 18298 - 19170 (+)
Gene ID: HRGMv2_3226_24_19
Type: TC
Location: 19232 - 20080 (+)
Type: TC
Location: 19232 - 20080 (+)
Gene ID: HRGMv2_3226_24_20
Type: TC
Location: 20080 - 20946 (+)
Type: TC
Location: 20080 - 20946 (+)
Gene ID: HRGMv2_3226_24_21
Type: TC
Location: 20951 - 21700 (+)
Type: TC
Location: 20951 - 21700 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Lentihominibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.