Cluster: HRGMv2_3226_CGC4
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3226
- CGC Family ID: CGCFAM_00007
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3226_21 | HRGMv2_3226_21_6 | 4579 | 6711 | - | PL12 |
| NULL(UNKNOWN) | HRGMv2_3226_21 | HRGMv2_3226_21_7 | 6738 | 8525 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3226_21 | HRGMv2_3226_21_8 | 8534 | 12334 | - | GT2 |
| TC | HRGMv2_3226_21 | HRGMv2_3226_21_9 | 12364 | 13113 | - | 3.A.1.103.1 |
| pfam | HRGMv2_3226_21 | HRGMv2_3226_21_10 | 13113 | 13889 | - | ABC2_membrane |
| CAZyme | HRGMv2_3226_21 | HRGMv2_3226_21_11 | 13858 | 16392 | - | GT2 |
| pfam | HRGMv2_3226_21 | HRGMv2_3226_21_12 | 16413 | 17600 | - | UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | HRGMv2_3226_21 | HRGMv2_3226_21_13 | 17614 | 18330 | - | GT26 |
| NULL(UNKNOWN) | HRGMv2_3226_21 | HRGMv2_3226_21_14 | 18348 | 19229 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3226_21 | HRGMv2_3226_21_15 | 19277 | 19846 | - | 3.A.1.103.4 |
Gene ID: HRGMv2_3226_21_6
Type: CAZyme
Location: 4579 - 6711 (-)
Type: CAZyme
Location: 4579 - 6711 (-)
Gene ID: HRGMv2_3226_21_7
Type:
Location: 6738 - 8525 (-)
Type:
Location: 6738 - 8525 (-)
Gene ID: HRGMv2_3226_21_8
Type: CAZyme
Location: 8534 - 12334 (-)
Type: CAZyme
Location: 8534 - 12334 (-)
Gene ID: HRGMv2_3226_21_9
Type: TC
Location: 12364 - 13113 (-)
Type: TC
Location: 12364 - 13113 (-)
Gene ID: HRGMv2_3226_21_10
Type: pfam
Location: 13113 - 13889 (-)
Type: pfam
Location: 13113 - 13889 (-)
Gene ID: HRGMv2_3226_21_11
Type: CAZyme
Location: 13858 - 16392 (-)
Type: CAZyme
Location: 13858 - 16392 (-)
Gene ID: HRGMv2_3226_21_12
Type: pfam
Location: 16413 - 17600 (-)
Type: pfam
Location: 16413 - 17600 (-)
Gene ID: HRGMv2_3226_21_13
Type: CAZyme
Location: 17614 - 18330 (-)
Type: CAZyme
Location: 17614 - 18330 (-)
Gene ID: HRGMv2_3226_21_14
Type:
Location: 18348 - 19229 (-)
Type:
Location: 18348 - 19229 (-)
Gene ID: HRGMv2_3226_21_15
Type: TC
Location: 19277 - 19846 (-)
Type: TC
Location: 19277 - 19846 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
Lentihominibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.