Cluster: HRGMv2_3219_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3219
- CGC Family ID: CGCFAM_00013
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3219_20 | HRGMv2_3219_20_12 | 9449 | 10561 | - | GT28 |
| TC | HRGMv2_3219_20 | HRGMv2_3219_20_13 | 10627 | 11715 | - | 2.A.103.1.3 |
| pfam | HRGMv2_3219_20 | HRGMv2_3219_20_14 | 11762 | 13096 | - | Mur_ligase | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_3219_20 | HRGMv2_3219_20_15 | 13141 | 14115 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3219_20_12
Type: CAZyme
Location: 9449 - 10561 (-)
Type: CAZyme
Location: 9449 - 10561 (-)
Gene ID: HRGMv2_3219_20_13
Type: TC
Location: 10627 - 11715 (-)
Type: TC
Location: 10627 - 11715 (-)
Gene ID: HRGMv2_3219_20_14
Type: pfam
Location: 11762 - 13096 (-)
Type: pfam
Location: 11762 - 13096 (-)
Gene ID: HRGMv2_3219_20_15
Type: TC
Location: 13141 - 14115 (-)
Type: TC
Location: 13141 - 14115 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_B
Class
Peptococcia
Order
Peptococcales
Family
Peptococcaceae
Genus
UBA7185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.