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Cluster: HRGMv2_3219_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3219_5 HRGMv2_3219_5_12 11227 12234 + GT2
pfam HRGMv2_3219_5 HRGMv2_3219_5_13 12215 12607 + GtrA_DPMS_TM
pfam HRGMv2_3219_5 HRGMv2_3219_5_14 13296 15182 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_3219_5 HRGMv2_3219_5_15 15224 15562 + 1.E.40.3.4
pfam HRGMv2_3219_5 HRGMv2_3219_5_16 15564 16349 + Hydrolase | S6PP | Hydrolase_3
STP HRGMv2_3219_5 HRGMv2_3219_5_17 16379 17587 + Peripla_BP_2
TC HRGMv2_3219_5 HRGMv2_3219_5_18 17668 18705 + 3.A.1.13.2
TC HRGMv2_3219_5 HRGMv2_3219_5_19 18705 19781 + 3.A.1.14.14
Gene ID: HRGMv2_3219_5_12
Type: CAZyme
Location: 11227 - 12234 (+)
Gene ID: HRGMv2_3219_5_13
Type: pfam
Location: 12215 - 12607 (+)
Gene ID: HRGMv2_3219_5_14
Type: pfam
Location: 13296 - 15182 (+)
Gene ID: HRGMv2_3219_5_15
Type: TC
Location: 15224 - 15562 (+)
Gene ID: HRGMv2_3219_5_16
Type: pfam
Location: 15564 - 16349 (+)
Gene ID: HRGMv2_3219_5_17
Type: STP
Location: 16379 - 17587 (+)
Gene ID: HRGMv2_3219_5_18
Type: TC
Location: 17668 - 18705 (+)
Gene ID: HRGMv2_3219_5_19
Type: TC
Location: 18705 - 19781 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_B
→
Class
Peptococcia
→
Order
Peptococcales
→
Family
Peptococcaceae
→
Genus
UBA7185
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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