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Cluster: HRGMv2_3218_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3218_8 HRGMv2_3218_8_61 70190 72004 + 3.A.25.2.1
CAZyme HRGMv2_3218_8 HRGMv2_3218_8_62 72162 73001 + GT8
pfam HRGMv2_3218_8 HRGMv2_3218_8_63 73304 74593 + Cys_Met_Meta_PP
pfam HRGMv2_3218_8 HRGMv2_3218_8_64 74654 75595 + HTS
TC HRGMv2_3218_8 HRGMv2_3218_8_65 75611 76630 + 3.A.1.24.2
TC HRGMv2_3218_8 HRGMv2_3218_8_66 76623 77288 + 3.A.1.24.5
TC HRGMv2_3218_8 HRGMv2_3218_8_67 77322 78218 + 3.A.1.24.5
Gene ID: HRGMv2_3218_8_61
Type: TC
Location: 70190 - 72004 (+)
Gene ID: HRGMv2_3218_8_62
Type: CAZyme
Location: 72162 - 73001 (+)
Gene ID: HRGMv2_3218_8_63
Type: pfam
Location: 73304 - 74593 (+)
Gene ID: HRGMv2_3218_8_64
Type: pfam
Location: 74654 - 75595 (+)
Gene ID: HRGMv2_3218_8_65
Type: TC
Location: 75611 - 76630 (+)
Gene ID: HRGMv2_3218_8_66
Type: TC
Location: 76623 - 77288 (+)
Gene ID: HRGMv2_3218_8_67
Type: TC
Location: 77322 - 78218 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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