Cluster: HRGMv2_3218_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3218
- CGC Family ID: CGCFAM_00917
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3218_5 | HRGMv2_3218_5_28 | 22825 | 24528 | - | GH26 |
| pfam | HRGMv2_3218_5 | HRGMv2_3218_5_29 | 24676 | 28053 | + | PDDEXK_1 | ADDB_N |
| pfam | HRGMv2_3218_5 | HRGMv2_3218_5_30 | 28050 | 31490 | + | UvrD-helicase | PDDEXK_1 | AAA_19 | UvrD_C |
| TC | HRGMv2_3218_5 | HRGMv2_3218_5_31 | 31544 | 32434 | - | 2.A.7.3.12 |
| CAZyme | HRGMv2_3218_5 | HRGMv2_3218_5_32 | 32516 | 33460 | - | CE4 |
Gene ID: HRGMv2_3218_5_28
Type: CAZyme
Location: 22825 - 24528 (-)
Type: CAZyme
Location: 22825 - 24528 (-)
Gene ID: HRGMv2_3218_5_29
Type: pfam
Location: 24676 - 28053 (+)
Type: pfam
Location: 24676 - 28053 (+)
Gene ID: HRGMv2_3218_5_30
Type: pfam
Location: 28050 - 31490 (+)
Type: pfam
Location: 28050 - 31490 (+)
Gene ID: HRGMv2_3218_5_31
Type: TC
Location: 31544 - 32434 (-)
Type: TC
Location: 31544 - 32434 (-)
Gene ID: HRGMv2_3218_5_32
Type: CAZyme
Location: 32516 - 33460 (-)
Type: CAZyme
Location: 32516 - 33460 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_B
Class
Peptococcia
Order
Peptococcales
Family
Peptococcaceae
Genus
UMGS1590
Species
UMGS1590 sp900552455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.