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Cluster: HRGMv2_3217_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3217_28 HRGMv2_3217_28_7 3560 4456 - 3.A.1.24.5
TC HRGMv2_3217_28 HRGMv2_3217_28_8 4494 5159 - 3.A.1.24.5
TC HRGMv2_3217_28 HRGMv2_3217_28_9 5152 6171 - 3.A.1.24.2
pfam HRGMv2_3217_28 HRGMv2_3217_28_10 6189 7124 - HTS
pfam HRGMv2_3217_28 HRGMv2_3217_28_11 7204 8493 - Cys_Met_Meta_PP
TC HRGMv2_3217_28 HRGMv2_3217_28_12 8845 9699 - 3.A.1.24.5
CAZyme HRGMv2_3217_28 HRGMv2_3217_28_13 10070 10930 - GT8
TC HRGMv2_3217_28 HRGMv2_3217_28_14 10967 12772 - 3.A.16.1.1
Gene ID: HRGMv2_3217_28_7
Type: TC
Location: 3560 - 4456 (-)
Gene ID: HRGMv2_3217_28_8
Type: TC
Location: 4494 - 5159 (-)
Gene ID: HRGMv2_3217_28_9
Type: TC
Location: 5152 - 6171 (-)
Gene ID: HRGMv2_3217_28_10
Type: pfam
Location: 6189 - 7124 (-)
Gene ID: HRGMv2_3217_28_11
Type: pfam
Location: 7204 - 8493 (-)
Gene ID: HRGMv2_3217_28_12
Type: TC
Location: 8845 - 9699 (-)
Gene ID: HRGMv2_3217_28_13
Type: CAZyme
Location: 10070 - 10930 (-)
Gene ID: HRGMv2_3217_28_14
Type: TC
Location: 10967 - 12772 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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