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Cluster: HRGMv2_3217_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3217_19 HRGMv2_3217_19_15 17453 18178 + GT26
TC HRGMv2_3217_19 HRGMv2_3217_19_16 18386 20095 + 2.A.58.2.2
TC HRGMv2_3217_19 HRGMv2_3217_19_17 20265 21710 - 2.A.38.1.1
TC HRGMv2_3217_19 HRGMv2_3217_19_18 21715 23088 - 2.A.38.1.1
TF HRGMv2_3217_19 HRGMv2_3217_19_19 23113 24039 - HTH_1
TC HRGMv2_3217_19 HRGMv2_3217_19_20 24244 24978 + 9.B.20.1.4
TC HRGMv2_3217_19 HRGMv2_3217_19_21 24995 25681 + 9.B.20.1.4
Gene ID: HRGMv2_3217_19_15
Type: CAZyme
Location: 17453 - 18178 (+)
Gene ID: HRGMv2_3217_19_16
Type: TC
Location: 18386 - 20095 (+)
Gene ID: HRGMv2_3217_19_17
Type: TC
Location: 20265 - 21710 (-)
Gene ID: HRGMv2_3217_19_18
Type: TC
Location: 21715 - 23088 (-)
Gene ID: HRGMv2_3217_19_19
Type: TF
Location: 23113 - 24039 (-)
Gene ID: HRGMv2_3217_19_20
Type: TC
Location: 24244 - 24978 (+)
Gene ID: HRGMv2_3217_19_21
Type: TC
Location: 24995 - 25681 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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