Cluster: HRGMv2_3216_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3216
- CGC Family ID: CGCFAM_00056
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3216_47 | HRGMv2_3216_47_12 | 10867 | 11997 | + | GT4 |
| TF | HRGMv2_3216_47 | HRGMv2_3216_47_13 | 12017 | 12718 | + | Trans_reg_C |
| STP | HRGMv2_3216_47 | HRGMv2_3216_47_14 | 12702 | 14135 | + | HATPase_c | HisKA |
| TC | HRGMv2_3216_47 | HRGMv2_3216_47_15 | 14196 | 15164 | - | 2.A.16.6.1 |
| pfam | HRGMv2_3216_47 | HRGMv2_3216_47_16 | 15477 | 16505 | + | DUF4097 |
| TC | HRGMv2_3216_47 | HRGMv2_3216_47_17 | 16581 | 17366 | + | 2.A.102.4.4 |
Gene ID: HRGMv2_3216_47_12
Type: CAZyme
Location: 10867 - 11997 (+)
Type: CAZyme
Location: 10867 - 11997 (+)
Gene ID: HRGMv2_3216_47_13
Type: TF
Location: 12017 - 12718 (+)
Type: TF
Location: 12017 - 12718 (+)
Gene ID: HRGMv2_3216_47_14
Type: STP
Location: 12702 - 14135 (+)
Type: STP
Location: 12702 - 14135 (+)
Gene ID: HRGMv2_3216_47_15
Type: TC
Location: 14196 - 15164 (-)
Type: TC
Location: 14196 - 15164 (-)
Gene ID: HRGMv2_3216_47_16
Type: pfam
Location: 15477 - 16505 (+)
Type: pfam
Location: 15477 - 16505 (+)
Gene ID: HRGMv2_3216_47_17
Type: TC
Location: 16581 - 17366 (+)
Type: TC
Location: 16581 - 17366 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_B
Class
Peptococcia
Order
Peptococcales
Family
Peptococcaceae
Genus
UMGS1590
Species
UMGS1590 sp937976375
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.