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Cluster: HRGMv2_3216_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3216_12 HRGMv2_3216_12_12 9585 10481 - 3.A.1.24.5
TC HRGMv2_3216_12 HRGMv2_3216_12_13 10517 11182 - 3.A.1.24.5
TC HRGMv2_3216_12 HRGMv2_3216_12_14 11175 12194 - 3.A.1.24.2
pfam HRGMv2_3216_12 HRGMv2_3216_12_15 12212 13147 - HTS
pfam HRGMv2_3216_12 HRGMv2_3216_12_16 13227 14516 - Cys_Met_Meta_PP
TC HRGMv2_3216_12 HRGMv2_3216_12_17 14866 15714 - 3.A.1.24.5
CAZyme HRGMv2_3216_12 HRGMv2_3216_12_18 16085 16945 - GT8
TC HRGMv2_3216_12 HRGMv2_3216_12_19 16982 18787 - 3.A.16.1.1
Gene ID: HRGMv2_3216_12_12
Type: TC
Location: 9585 - 10481 (-)
Gene ID: HRGMv2_3216_12_13
Type: TC
Location: 10517 - 11182 (-)
Gene ID: HRGMv2_3216_12_14
Type: TC
Location: 11175 - 12194 (-)
Gene ID: HRGMv2_3216_12_15
Type: pfam
Location: 12212 - 13147 (-)
Gene ID: HRGMv2_3216_12_16
Type: pfam
Location: 13227 - 14516 (-)
Gene ID: HRGMv2_3216_12_17
Type: TC
Location: 14866 - 15714 (-)
Gene ID: HRGMv2_3216_12_18
Type: CAZyme
Location: 16085 - 16945 (-)
Gene ID: HRGMv2_3216_12_19
Type: TC
Location: 16982 - 18787 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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