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Cluster: HRGMv2_3216_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3216_10 HRGMv2_3216_10_47 43161 43847 - 9.B.20.1.4
TC HRGMv2_3216_10 HRGMv2_3216_10_48 43863 44597 - 9.B.20.1.4
TF HRGMv2_3216_10 HRGMv2_3216_10_49 44801 45727 + HTH_1
TC HRGMv2_3216_10 HRGMv2_3216_10_50 45752 47125 + 2.A.38.1.1
TC HRGMv2_3216_10 HRGMv2_3216_10_51 47130 48575 + 2.A.38.1.1
TC HRGMv2_3216_10 HRGMv2_3216_10_52 48748 50457 - 2.A.58.2.2
CAZyme HRGMv2_3216_10 HRGMv2_3216_10_53 50665 51390 - GT26
Gene ID: HRGMv2_3216_10_47
Type: TC
Location: 43161 - 43847 (-)
Gene ID: HRGMv2_3216_10_48
Type: TC
Location: 43863 - 44597 (-)
Gene ID: HRGMv2_3216_10_49
Type: TF
Location: 44801 - 45727 (+)
Gene ID: HRGMv2_3216_10_50
Type: TC
Location: 45752 - 47125 (+)
Gene ID: HRGMv2_3216_10_51
Type: TC
Location: 47130 - 48575 (+)
Gene ID: HRGMv2_3216_10_52
Type: TC
Location: 48748 - 50457 (-)
Gene ID: HRGMv2_3216_10_53
Type: CAZyme
Location: 50665 - 51390 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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