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Cluster: HRGMv2_3210_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3210_14 HRGMv2_3210_14_40 39360 41075 - GH63
pfam HRGMv2_3210_14 HRGMv2_3210_14_41 41091 42356 - GFO_IDH_MocA
CAZyme HRGMv2_3210_14 HRGMv2_3210_14_42 42353 43945 - GH20
CAZyme HRGMv2_3210_14 HRGMv2_3210_14_43 43972 46191 - GH35
pfam HRGMv2_3210_14 HRGMv2_3210_14_44 46226 47557 - Glyco_hydro_101
CAZyme HRGMv2_3210_14 HRGMv2_3210_14_45 47599 49842 - GH2
CAZyme HRGMv2_3210_14 HRGMv2_3210_14_46 49856 52861 - GH2
pfam HRGMv2_3210_14 HRGMv2_3210_14_47 52924 55320 - MFS_2
TF HRGMv2_3210_14 HRGMv2_3210_14_48 55339 56181 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_3210_14 HRGMv2_3210_14_49 56340 57680 + GH29
pfam HRGMv2_3210_14 HRGMv2_3210_14_50 57697 58959 + GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
pfam HRGMv2_3210_14 HRGMv2_3210_14_51 58949 59392 + NMN_transporter
CAZyme HRGMv2_3210_14 HRGMv2_3210_14_52 59608 60642 + GH29
NULL(UNKNOWN) HRGMv2_3210_14 HRGMv2_3210_14_53 60796 61263 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3210_14 HRGMv2_3210_14_54 61390 62430 + Glyco_hydro_31_2nd | Melibiase
CAZyme HRGMv2_3210_14 HRGMv2_3210_14_55 62507 63559 + GH117
pfam HRGMv2_3210_14 HRGMv2_3210_14_56 63701 65074 + Glyco_hydro_101
pfam HRGMv2_3210_14 HRGMv2_3210_14_57 65446 67011 - Resolvase | Recombinase | Zn_ribbon_recom
TC HRGMv2_3210_14 HRGMv2_3210_14_58 67037 67633 - 3.A.7.19.1
Gene ID: HRGMv2_3210_14_40
Type: CAZyme
Location: 39360 - 41075 (-)
Gene ID: HRGMv2_3210_14_41
Type: pfam
Location: 41091 - 42356 (-)
Gene ID: HRGMv2_3210_14_42
Type: CAZyme
Location: 42353 - 43945 (-)
Gene ID: HRGMv2_3210_14_43
Type: CAZyme
Location: 43972 - 46191 (-)
Gene ID: HRGMv2_3210_14_44
Type: pfam
Location: 46226 - 47557 (-)
Gene ID: HRGMv2_3210_14_45
Type: CAZyme
Location: 47599 - 49842 (-)
Gene ID: HRGMv2_3210_14_46
Type: CAZyme
Location: 49856 - 52861 (-)
Gene ID: HRGMv2_3210_14_47
Type: pfam
Location: 52924 - 55320 (-)
Gene ID: HRGMv2_3210_14_48
Type: TF
Location: 55339 - 56181 (-)
Gene ID: HRGMv2_3210_14_49
Type: CAZyme
Location: 56340 - 57680 (+)
Gene ID: HRGMv2_3210_14_50
Type: pfam
Location: 57697 - 58959 (+)
Gene ID: HRGMv2_3210_14_51
Type: pfam
Location: 58949 - 59392 (+)
Gene ID: HRGMv2_3210_14_52
Type: CAZyme
Location: 59608 - 60642 (+)
Gene ID: HRGMv2_3210_14_53
Type:
Location: 60796 - 61263 (+)
Gene ID: HRGMv2_3210_14_54
Type: pfam
Location: 61390 - 62430 (+)
Gene ID: HRGMv2_3210_14_55
Type: CAZyme
Location: 62507 - 63559 (+)
Gene ID: HRGMv2_3210_14_56
Type: pfam
Location: 63701 - 65074 (+)
Gene ID: HRGMv2_3210_14_57
Type: pfam
Location: 65446 - 67011 (-)
Gene ID: HRGMv2_3210_14_58
Type: TC
Location: 67037 - 67633 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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