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Cluster: HRGMv2_3210_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3210_9 HRGMv2_3210_9_40 37999 38778 - 3.A.1.122.14
TC HRGMv2_3210_9 HRGMv2_3210_9_41 38941 39384 + 9.A.11.1.1
TC HRGMv2_3210_9 HRGMv2_3210_9_42 39409 40422 + 9.A.11.1.1
NULL(UNKNOWN) HRGMv2_3210_9 HRGMv2_3210_9_43 40443 40598 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3210_9 HRGMv2_3210_9_44 40862 41146 + Thioredoxin | Thioredoxin_2
CAZyme HRGMv2_3210_9 HRGMv2_3210_9_45 41229 42374 - GH63
TF HRGMv2_3210_9 HRGMv2_3210_9_46 42367 43227 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_3210_9 HRGMv2_3210_9_47 43335 44996 + GH36
TC HRGMv2_3210_9 HRGMv2_3210_9_48 44993 46495 + 2.A.2.3.2
CAZyme HRGMv2_3210_9 HRGMv2_3210_9_49 46643 47767 + CE9
Gene ID: HRGMv2_3210_9_40
Type: TC
Location: 37999 - 38778 (-)
Gene ID: HRGMv2_3210_9_41
Type: TC
Location: 38941 - 39384 (+)
Gene ID: HRGMv2_3210_9_42
Type: TC
Location: 39409 - 40422 (+)
Gene ID: HRGMv2_3210_9_43
Type:
Location: 40443 - 40598 (+)
Gene ID: HRGMv2_3210_9_44
Type: pfam
Location: 40862 - 41146 (+)
Gene ID: HRGMv2_3210_9_45
Type: CAZyme
Location: 41229 - 42374 (-)
Gene ID: HRGMv2_3210_9_46
Type: TF
Location: 42367 - 43227 (-)
Gene ID: HRGMv2_3210_9_47
Type: CAZyme
Location: 43335 - 44996 (+)
Gene ID: HRGMv2_3210_9_48
Type: TC
Location: 44993 - 46495 (+)
Gene ID: HRGMv2_3210_9_49
Type: CAZyme
Location: 46643 - 47767 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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