Cluster: HRGMv2_3210_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3210
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3210_9 | HRGMv2_3210_9_24 | 19879 | 21630 | - | GH35 |
| STP | HRGMv2_3210_9 | HRGMv2_3210_9_25 | 22123 | 22728 | + | Sigma70_r2 | Sigma70_r4_2 |
| pfam | HRGMv2_3210_9 | HRGMv2_3210_9_26 | 22718 | 24031 | + | PepSY | PepSY | RsgI_M |
| TC | HRGMv2_3210_9 | HRGMv2_3210_9_27 | 24251 | 25609 | + | 2.A.35.1.5 |
| CAZyme | HRGMv2_3210_9 | HRGMv2_3210_9_28 | 25817 | 26878 | + | GT4 |
| CAZyme | HRGMv2_3210_9 | HRGMv2_3210_9_29 | 26904 | 27620 | + | GT26 |
Gene ID: HRGMv2_3210_9_24
Type: CAZyme
Location: 19879 - 21630 (-)
Type: CAZyme
Location: 19879 - 21630 (-)
Gene ID: HRGMv2_3210_9_25
Type: STP
Location: 22123 - 22728 (+)
Type: STP
Location: 22123 - 22728 (+)
Gene ID: HRGMv2_3210_9_26
Type: pfam
Location: 22718 - 24031 (+)
Type: pfam
Location: 22718 - 24031 (+)
Gene ID: HRGMv2_3210_9_27
Type: TC
Location: 24251 - 25609 (+)
Type: TC
Location: 24251 - 25609 (+)
Gene ID: HRGMv2_3210_9_28
Type: CAZyme
Location: 25817 - 26878 (+)
Type: CAZyme
Location: 25817 - 26878 (+)
Gene ID: HRGMv2_3210_9_29
Type: CAZyme
Location: 26904 - 27620 (+)
Type: CAZyme
Location: 26904 - 27620 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS263
Species
UMGS263 sp949289045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.