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Cluster: HRGMv2_3210_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3210_6 HRGMv2_3210_6_72 93795 94439 + 1.C.113.1.1
pfam HRGMv2_3210_6 HRGMv2_3210_6_73 94512 96173 - BcrAD_BadFG | HGD-D | HGD-D
pfam HRGMv2_3210_6 HRGMv2_3210_6_74 96183 97457 - HGD-D
CAZyme HRGMv2_3210_6 HRGMv2_3210_6_75 98730 100388 - GH13_31
pfam HRGMv2_3210_6 HRGMv2_3210_6_76 100381 102306 - GTP_EFTU | EFG_C | MMR_HSR1 | EFG_IV | EFG_III | EF-G_D2
pfam HRGMv2_3210_6 HRGMv2_3210_6_77 102441 102959 + YcxB
TC HRGMv2_3210_6 HRGMv2_3210_6_78 103014 103808 - 2.A.5.5.2
Gene ID: HRGMv2_3210_6_72
Type: TC
Location: 93795 - 94439 (+)
Gene ID: HRGMv2_3210_6_73
Type: pfam
Location: 94512 - 96173 (-)
Gene ID: HRGMv2_3210_6_74
Type: pfam
Location: 96183 - 97457 (-)
Gene ID: HRGMv2_3210_6_75
Type: CAZyme
Location: 98730 - 100388 (-)
Gene ID: HRGMv2_3210_6_76
Type: pfam
Location: 100381 - 102306 (-)
Gene ID: HRGMv2_3210_6_77
Type: pfam
Location: 102441 - 102959 (+)
Gene ID: HRGMv2_3210_6_78
Type: TC
Location: 103014 - 103808 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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