Cluster: HRGMv2_3210_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3210
- CGC Family ID: CGCFAM_04076
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3210_1 | HRGMv2_3210_1_38 | 47488 | 49077 | - | 2.A.21.9.2 |
| TF | HRGMv2_3210_1 | HRGMv2_3210_1_39 | 49067 | 49768 | - | Trans_reg_C |
| TC | HRGMv2_3210_1 | HRGMv2_3210_1_40 | 49975 | 51819 | - | 3.A.1.135.6 |
| TC | HRGMv2_3210_1 | HRGMv2_3210_1_41 | 51816 | 53570 | - | 3.A.1.135.7 |
| CAZyme | HRGMv2_3210_1 | HRGMv2_3210_1_42 | 53865 | 55286 | + | GH29 |
Gene ID: HRGMv2_3210_1_38
Type: TC
Location: 47488 - 49077 (-)
Type: TC
Location: 47488 - 49077 (-)
Gene ID: HRGMv2_3210_1_39
Type: TF
Location: 49067 - 49768 (-)
Type: TF
Location: 49067 - 49768 (-)
Gene ID: HRGMv2_3210_1_40
Type: TC
Location: 49975 - 51819 (-)
Type: TC
Location: 49975 - 51819 (-)
Gene ID: HRGMv2_3210_1_41
Type: TC
Location: 51816 - 53570 (-)
Type: TC
Location: 51816 - 53570 (-)
Gene ID: HRGMv2_3210_1_42
Type: CAZyme
Location: 53865 - 55286 (+)
Type: CAZyme
Location: 53865 - 55286 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS263
Species
UMGS263 sp949289045
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.