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Cluster: HRGMv2_3210_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3210_5 HRGMv2_3210_5_34 40682 41890 - GH29
STP HRGMv2_3210_5 HRGMv2_3210_5_35 42217 42453 - PTS-HPr
TC HRGMv2_3210_5 HRGMv2_3210_5_36 42495 43268 - 3.A.1.34.1
TC HRGMv2_3210_5 HRGMv2_3210_5_37 43255 44181 - 3.A.1.34.1
pfam HRGMv2_3210_5 HRGMv2_3210_5_38 44221 45204 - ABC_sub_bind
TC HRGMv2_3210_5 HRGMv2_3210_5_39 45772 47130 + 2.A.38.4.3
pfam HRGMv2_3210_5 HRGMv2_3210_5_40 47270 48694 + Wzy_C
pfam HRGMv2_3210_5 HRGMv2_3210_5_41 48774 49640 + Metallophos | Metallophos_2
TC HRGMv2_3210_5 HRGMv2_3210_5_42 49753 51138 + 2.A.2.1.1
Gene ID: HRGMv2_3210_5_34
Type: CAZyme
Location: 40682 - 41890 (-)
Gene ID: HRGMv2_3210_5_35
Type: STP
Location: 42217 - 42453 (-)
Gene ID: HRGMv2_3210_5_36
Type: TC
Location: 42495 - 43268 (-)
Gene ID: HRGMv2_3210_5_37
Type: TC
Location: 43255 - 44181 (-)
Gene ID: HRGMv2_3210_5_38
Type: pfam
Location: 44221 - 45204 (-)
Gene ID: HRGMv2_3210_5_39
Type: TC
Location: 45772 - 47130 (+)
Gene ID: HRGMv2_3210_5_40
Type: pfam
Location: 47270 - 48694 (+)
Gene ID: HRGMv2_3210_5_41
Type: pfam
Location: 48774 - 49640 (+)
Gene ID: HRGMv2_3210_5_42
Type: TC
Location: 49753 - 51138 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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