Cluster: HRGMv2_3209_CGC3
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3209
- CGC Family ID: CGCFAM_10268
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3209_7 | HRGMv2_3209_7_10 | 9385 | 10149 | - | 3.A.1.122.14 |
| TC | HRGMv2_3209_7 | HRGMv2_3209_7_11 | 10312 | 10755 | + | 9.A.11.1.1 |
| TC | HRGMv2_3209_7 | HRGMv2_3209_7_12 | 10780 | 11793 | + | 9.A.11.1.1 |
| NULL(UNKNOWN) | HRGMv2_3209_7 | HRGMv2_3209_7_13 | 11813 | 11977 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3209_7 | HRGMv2_3209_7_14 | 12894 | 13178 | + | Thioredoxin | Thioredoxin_2 |
| CAZyme | HRGMv2_3209_7 | HRGMv2_3209_7_15 | 13272 | 14417 | - | GH63 |
| TF | HRGMv2_3209_7 | HRGMv2_3209_7_16 | 14410 | 15270 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_3209_7 | HRGMv2_3209_7_17 | 15378 | 17039 | + | GH36 |
| TC | HRGMv2_3209_7 | HRGMv2_3209_7_18 | 17036 | 18538 | + | 2.A.2.2.1 |
| NULL(UNKNOWN) | HRGMv2_3209_7 | HRGMv2_3209_7_19 | 18711 | 19277 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3209_7 | HRGMv2_3209_7_20 | 19378 | 20502 | + | CE9 |
Gene ID: HRGMv2_3209_7_10
Type: TC
Location: 9385 - 10149 (-)
Type: TC
Location: 9385 - 10149 (-)
Gene ID: HRGMv2_3209_7_11
Type: TC
Location: 10312 - 10755 (+)
Type: TC
Location: 10312 - 10755 (+)
Gene ID: HRGMv2_3209_7_12
Type: TC
Location: 10780 - 11793 (+)
Type: TC
Location: 10780 - 11793 (+)
Gene ID: HRGMv2_3209_7_13
Type:
Location: 11813 - 11977 (+)
Type:
Location: 11813 - 11977 (+)
Gene ID: HRGMv2_3209_7_14
Type: pfam
Location: 12894 - 13178 (+)
Type: pfam
Location: 12894 - 13178 (+)
Gene ID: HRGMv2_3209_7_15
Type: CAZyme
Location: 13272 - 14417 (-)
Type: CAZyme
Location: 13272 - 14417 (-)
Gene ID: HRGMv2_3209_7_16
Type: TF
Location: 14410 - 15270 (-)
Type: TF
Location: 14410 - 15270 (-)
Gene ID: HRGMv2_3209_7_17
Type: CAZyme
Location: 15378 - 17039 (+)
Type: CAZyme
Location: 15378 - 17039 (+)
Gene ID: HRGMv2_3209_7_18
Type: TC
Location: 17036 - 18538 (+)
Type: TC
Location: 17036 - 18538 (+)
Gene ID: HRGMv2_3209_7_19
Type:
Location: 18711 - 19277 (+)
Type:
Location: 18711 - 19277 (+)
Gene ID: HRGMv2_3209_7_20
Type: CAZyme
Location: 19378 - 20502 (+)
Type: CAZyme
Location: 19378 - 20502 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS263
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.