Cluster: HRGMv2_3209_CGC14
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3209
- CGC Family ID: CGCFAM_06195
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3209_42 | HRGMv2_3209_42_3 | 1180 | 2769 | + | 2.A.50.2.1 |
| NULL(UNKNOWN) | HRGMv2_3209_42 | HRGMv2_3209_42_4 | 2782 | 3747 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3209_42 | HRGMv2_3209_42_5 | 3853 | 4107 | - | MazE_antitoxin |
| TC | HRGMv2_3209_42 | HRGMv2_3209_42_6 | 4278 | 4871 | + | 9.B.156.3.1 |
| TC | HRGMv2_3209_42 | HRGMv2_3209_42_7 | 4873 | 5394 | + | 9.B.156.3.1 |
| NULL(UNKNOWN) | HRGMv2_3209_42 | HRGMv2_3209_42_8 | 5494 | 5664 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3209_42 | HRGMv2_3209_42_9 | 5883 | 6416 | - | Acetyltransf_1 | Acetyltransf_7 |
| CAZyme | HRGMv2_3209_42 | HRGMv2_3209_42_10 | 6437 | 8515 | - | GH36 |
| pfam | HRGMv2_3209_42 | HRGMv2_3209_42_11 | 8776 | 9369 | - | LRR_5 | LRR_5 |
| pfam | HRGMv2_3209_42 | HRGMv2_3209_42_12 | 9371 | 11032 | - | MFS_1 | MFS_2 |
| CAZyme | HRGMv2_3209_42 | HRGMv2_3209_42_13 | 11076 | 12851 | - | GH127 |
Gene ID: HRGMv2_3209_42_3
Type: TC
Location: 1180 - 2769 (+)
Type: TC
Location: 1180 - 2769 (+)
Gene ID: HRGMv2_3209_42_4
Type:
Location: 2782 - 3747 (+)
Type:
Location: 2782 - 3747 (+)
Gene ID: HRGMv2_3209_42_5
Type: pfam
Location: 3853 - 4107 (-)
Type: pfam
Location: 3853 - 4107 (-)
Gene ID: HRGMv2_3209_42_6
Type: TC
Location: 4278 - 4871 (+)
Type: TC
Location: 4278 - 4871 (+)
Gene ID: HRGMv2_3209_42_7
Type: TC
Location: 4873 - 5394 (+)
Type: TC
Location: 4873 - 5394 (+)
Gene ID: HRGMv2_3209_42_8
Type:
Location: 5494 - 5664 (+)
Type:
Location: 5494 - 5664 (+)
Gene ID: HRGMv2_3209_42_9
Type: pfam
Location: 5883 - 6416 (-)
Type: pfam
Location: 5883 - 6416 (-)
Gene ID: HRGMv2_3209_42_10
Type: CAZyme
Location: 6437 - 8515 (-)
Type: CAZyme
Location: 6437 - 8515 (-)
Gene ID: HRGMv2_3209_42_11
Type: pfam
Location: 8776 - 9369 (-)
Type: pfam
Location: 8776 - 9369 (-)
Gene ID: HRGMv2_3209_42_12
Type: pfam
Location: 9371 - 11032 (-)
Type: pfam
Location: 9371 - 11032 (-)
Gene ID: HRGMv2_3209_42_13
Type: CAZyme
Location: 11076 - 12851 (-)
Type: CAZyme
Location: 11076 - 12851 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS263
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.