Cluster: HRGMv2_3209_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3209
- CGC Family ID: CGCFAM_10273
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3209_41 | HRGMv2_3209_41_2 | 224 | 1582 | - | 2.A.38.4.3 |
| pfam | HRGMv2_3209_41 | HRGMv2_3209_41_3 | 2166 | 3149 | + | ABC_sub_bind | Peripla_BP_6 |
| TC | HRGMv2_3209_41 | HRGMv2_3209_41_4 | 3189 | 4115 | + | 3.A.1.34.1 |
| TC | HRGMv2_3209_41 | HRGMv2_3209_41_5 | 4102 | 4875 | + | 3.A.1.34.1 |
| STP | HRGMv2_3209_41 | HRGMv2_3209_41_6 | 4909 | 5154 | + | PTS-HPr |
| CAZyme | HRGMv2_3209_41 | HRGMv2_3209_41_7 | 5490 | 6698 | + | GH29 |
Gene ID: HRGMv2_3209_41_2
Type: TC
Location: 224 - 1582 (-)
Type: TC
Location: 224 - 1582 (-)
Gene ID: HRGMv2_3209_41_3
Type: pfam
Location: 2166 - 3149 (+)
Type: pfam
Location: 2166 - 3149 (+)
Gene ID: HRGMv2_3209_41_4
Type: TC
Location: 3189 - 4115 (+)
Type: TC
Location: 3189 - 4115 (+)
Gene ID: HRGMv2_3209_41_5
Type: TC
Location: 4102 - 4875 (+)
Type: TC
Location: 4102 - 4875 (+)
Gene ID: HRGMv2_3209_41_6
Type: STP
Location: 4909 - 5154 (+)
Type: STP
Location: 4909 - 5154 (+)
Gene ID: HRGMv2_3209_41_7
Type: CAZyme
Location: 5490 - 6698 (+)
Type: CAZyme
Location: 5490 - 6698 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS263
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.