Cluster: HRGMv2_3208_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3208
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3208_62 | HRGMv2_3208_62_3 | 635 | 2791 | + | GH3 |
| TF | HRGMv2_3208_62 | HRGMv2_3208_62_4 | 2902 | 3336 | + | Rrf2 |
| STP | HRGMv2_3208_62 | HRGMv2_3208_62_5 | 3620 | 4549 | + | PALP |
| TC | HRGMv2_3208_62 | HRGMv2_3208_62_6 | 4807 | 5349 | - | 3.A.1.25.2 |
| pfam | HRGMv2_3208_62 | HRGMv2_3208_62_7 | 5346 | 6200 | - | BPL_C | BPL_LplA_LipB |
| CAZyme | HRGMv2_3208_62 | HRGMv2_3208_62_8 | 6385 | 6684 | - | CBM50 | CBM50 |
Gene ID: HRGMv2_3208_62_3
Type: CAZyme
Location: 635 - 2791 (+)
Type: CAZyme
Location: 635 - 2791 (+)
Gene ID: HRGMv2_3208_62_4
Type: TF
Location: 2902 - 3336 (+)
Type: TF
Location: 2902 - 3336 (+)
Gene ID: HRGMv2_3208_62_5
Type: STP
Location: 3620 - 4549 (+)
Type: STP
Location: 3620 - 4549 (+)
Gene ID: HRGMv2_3208_62_6
Type: TC
Location: 4807 - 5349 (-)
Type: TC
Location: 4807 - 5349 (-)
Gene ID: HRGMv2_3208_62_7
Type: pfam
Location: 5346 - 6200 (-)
Type: pfam
Location: 5346 - 6200 (-)
Gene ID: HRGMv2_3208_62_8
Type: CAZyme
Location: 6385 - 6684 (-)
Type: CAZyme
Location: 6385 - 6684 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1976
Species
UMGS1976 sp900556765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.