Cluster: HRGMv2_3208_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3208
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3208_35 | HRGMv2_3208_35_1 | 3 | 716 | + | 3.B.1.1.5 |
| CAZyme | HRGMv2_3208_35 | HRGMv2_3208_35_2 | 975 | 4124 | + | CE3 |
| pfam | HRGMv2_3208_35 | HRGMv2_3208_35_3 | 4328 | 5647 | + | Band_7 | Band_7_1 |
| pfam | HRGMv2_3208_35 | HRGMv2_3208_35_4 | 5843 | 6376 | + | Flavodoxin_2 | FMN_red |
| TC | HRGMv2_3208_35 | HRGMv2_3208_35_5 | 6457 | 7443 | + | 8.A.21.2.2 |
Gene ID: HRGMv2_3208_35_1
Type: TC
Location: 3 - 716 (+)
Type: TC
Location: 3 - 716 (+)
Gene ID: HRGMv2_3208_35_2
Type: CAZyme
Location: 975 - 4124 (+)
Type: CAZyme
Location: 975 - 4124 (+)
Gene ID: HRGMv2_3208_35_3
Type: pfam
Location: 4328 - 5647 (+)
Type: pfam
Location: 4328 - 5647 (+)
Gene ID: HRGMv2_3208_35_4
Type: pfam
Location: 5843 - 6376 (+)
Type: pfam
Location: 5843 - 6376 (+)
Gene ID: HRGMv2_3208_35_5
Type: TC
Location: 6457 - 7443 (+)
Type: TC
Location: 6457 - 7443 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1976
Species
UMGS1976 sp900556765
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.