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Cluster: HRGMv2_3208_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3208_22 HRGMv2_3208_22_11 9313 12054 - 3.A.5.1.3
pfam HRGMv2_3208_22 HRGMv2_3208_22_12 12373 12654 + Ribosomal_S6
TC HRGMv2_3208_22 HRGMv2_3208_22_13 12669 13097 + 3.A.7.19.1
pfam HRGMv2_3208_22 HRGMv2_3208_22_14 13159 13404 + Ribosomal_S18
CAZyme HRGMv2_3208_22 HRGMv2_3208_22_15 13466 15037 - GH77
TC HRGMv2_3208_22 HRGMv2_3208_22_16 15058 15924 - 3.A.1.1.45
TC HRGMv2_3208_22 HRGMv2_3208_22_17 15921 16835 - 3.A.1.1.45
TC HRGMv2_3208_22 HRGMv2_3208_22_18 16967 18313 - 3.A.1.1.45
Gene ID: HRGMv2_3208_22_11
Type: TC
Location: 9313 - 12054 (-)
Gene ID: HRGMv2_3208_22_12
Type: pfam
Location: 12373 - 12654 (+)
Gene ID: HRGMv2_3208_22_13
Type: TC
Location: 12669 - 13097 (+)
Gene ID: HRGMv2_3208_22_14
Type: pfam
Location: 13159 - 13404 (+)
Gene ID: HRGMv2_3208_22_15
Type: CAZyme
Location: 13466 - 15037 (-)
Gene ID: HRGMv2_3208_22_16
Type: TC
Location: 15058 - 15924 (-)
Gene ID: HRGMv2_3208_22_17
Type: TC
Location: 15921 - 16835 (-)
Gene ID: HRGMv2_3208_22_18
Type: TC
Location: 16967 - 18313 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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