Cluster: HRGMv2_3207_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3207
- CGC Family ID: CGCFAM_00153
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3207_14 | HRGMv2_3207_14_28 | 25722 | 26603 | + | 3.A.1.4.10 |
| TC | HRGMv2_3207_14 | HRGMv2_3207_14_29 | 26608 | 27711 | + | 3.A.1.4.8 |
| TC | HRGMv2_3207_14 | HRGMv2_3207_14_30 | 27708 | 28553 | + | 3.A.1.4.10 |
| TC | HRGMv2_3207_14 | HRGMv2_3207_14_31 | 28546 | 29265 | + | 3.A.1.4.10 |
| CAZyme | HRGMv2_3207_14 | HRGMv2_3207_14_32 | 29346 | 30119 | - | CE4 |
| CAZyme | HRGMv2_3207_14 | HRGMv2_3207_14_33 | 30208 | 31158 | - | GT2 |
Gene ID: HRGMv2_3207_14_28
Type: TC
Location: 25722 - 26603 (+)
Type: TC
Location: 25722 - 26603 (+)
Gene ID: HRGMv2_3207_14_29
Type: TC
Location: 26608 - 27711 (+)
Type: TC
Location: 26608 - 27711 (+)
Gene ID: HRGMv2_3207_14_30
Type: TC
Location: 27708 - 28553 (+)
Type: TC
Location: 27708 - 28553 (+)
Gene ID: HRGMv2_3207_14_31
Type: TC
Location: 28546 - 29265 (+)
Type: TC
Location: 28546 - 29265 (+)
Gene ID: HRGMv2_3207_14_32
Type: CAZyme
Location: 29346 - 30119 (-)
Type: CAZyme
Location: 29346 - 30119 (-)
Gene ID: HRGMv2_3207_14_33
Type: CAZyme
Location: 30208 - 31158 (-)
Type: CAZyme
Location: 30208 - 31158 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
SIG607
Species
SIG607 sp934476025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.