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Cluster: HRGMv2_3207_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3207_13 HRGMv2_3207_13_2 677 1537 + 3.A.1.24.5
TC HRGMv2_3207_13 HRGMv2_3207_13_3 1544 2575 + 3.A.1.24.2
TC HRGMv2_3207_13 HRGMv2_3207_13_4 2578 3279 + 3.A.1.24.5
pfam HRGMv2_3207_13 HRGMv2_3207_13_5 3343 4416 + NAD_synthase | ThiI | tRNA_Me_trans | tRNA_Me_trans_C | tRNA_Me_trans_M
CAZyme HRGMv2_3207_13 HRGMv2_3207_13_6 4505 5311 - GH16_3
TC HRGMv2_3207_13 HRGMv2_3207_13_7 5838 8234 + 3.A.3.23.2
CAZyme HRGMv2_3207_13 HRGMv2_3207_13_8 8338 10668 + CBM67 | GH78
Gene ID: HRGMv2_3207_13_2
Type: TC
Location: 677 - 1537 (+)
Gene ID: HRGMv2_3207_13_3
Type: TC
Location: 1544 - 2575 (+)
Gene ID: HRGMv2_3207_13_4
Type: TC
Location: 2578 - 3279 (+)
Gene ID: HRGMv2_3207_13_5
Type: pfam
Location: 3343 - 4416 (+)
Gene ID: HRGMv2_3207_13_6
Type: CAZyme
Location: 4505 - 5311 (-)
Gene ID: HRGMv2_3207_13_7
Type: TC
Location: 5838 - 8234 (+)
Gene ID: HRGMv2_3207_13_8
Type: CAZyme
Location: 8338 - 10668 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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