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Cluster: HRGMv2_3207_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3207_8 HRGMv2_3207_8_3 1115 2545 + 1.A.26.1.3
pfam HRGMv2_3207_8 HRGMv2_3207_8_4 2632 3312 + LiaF-TM
pfam HRGMv2_3207_8 HRGMv2_3207_8_5 3355 4671 - Amidase_3
TC HRGMv2_3207_8 HRGMv2_3207_8_6 4844 5764 + 3.A.1.105.3
pfam HRGMv2_3207_8 HRGMv2_3207_8_7 5761 6657 + ABC2_membrane | ABC2_membrane_3
TC HRGMv2_3207_8 HRGMv2_3207_8_8 6684 7394 + 3.A.1.147.6
TC HRGMv2_3207_8 HRGMv2_3207_8_9 7391 9001 + 3.A.1.147.6
TF HRGMv2_3207_8 HRGMv2_3207_8_10 9144 9512 + HTH_5
STP HRGMv2_3207_8 HRGMv2_3207_8_11 9526 9750 + HMA
TC HRGMv2_3207_8 HRGMv2_3207_8_12 9756 11639 + 3.A.3.6.10
pfam HRGMv2_3207_8 HRGMv2_3207_8_13 12057 16967 + Flg_new | Flg_new | Flg_new
CAZyme HRGMv2_3207_8 HRGMv2_3207_8_14 16986 18884 + GH16_3
NULL(UNKNOWN) HRGMv2_3207_8 HRGMv2_3207_8_15 18696 19304 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3207_8 HRGMv2_3207_8_16 19688 20293 + 2.A.87.1.3
Gene ID: HRGMv2_3207_8_3
Type: TC
Location: 1115 - 2545 (+)
Gene ID: HRGMv2_3207_8_4
Type: pfam
Location: 2632 - 3312 (+)
Gene ID: HRGMv2_3207_8_5
Type: pfam
Location: 3355 - 4671 (-)
Gene ID: HRGMv2_3207_8_6
Type: TC
Location: 4844 - 5764 (+)
Gene ID: HRGMv2_3207_8_7
Type: pfam
Location: 5761 - 6657 (+)
Gene ID: HRGMv2_3207_8_8
Type: TC
Location: 6684 - 7394 (+)
Gene ID: HRGMv2_3207_8_9
Type: TC
Location: 7391 - 9001 (+)
Gene ID: HRGMv2_3207_8_10
Type: TF
Location: 9144 - 9512 (+)
Gene ID: HRGMv2_3207_8_11
Type: STP
Location: 9526 - 9750 (+)
Gene ID: HRGMv2_3207_8_12
Type: TC
Location: 9756 - 11639 (+)
Gene ID: HRGMv2_3207_8_13
Type: pfam
Location: 12057 - 16967 (+)
Gene ID: HRGMv2_3207_8_14
Type: CAZyme
Location: 16986 - 18884 (+)
Gene ID: HRGMv2_3207_8_15
Type:
Location: 18696 - 19304 (-)
Gene ID: HRGMv2_3207_8_16
Type: TC
Location: 19688 - 20293 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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