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Cluster: HRGMv2_3207_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3207_2 HRGMv2_3207_2_2 531 1856 + 3.D.6.1.2
TC HRGMv2_3207_2 HRGMv2_3207_2_3 1853 2782 + 3.D.6.1.2
pfam HRGMv2_3207_2 HRGMv2_3207_2_4 2775 3491 + FMN_bind
TC HRGMv2_3207_2 HRGMv2_3207_2_5 3484 4215 + 3.D.6.1.2
TC HRGMv2_3207_2 HRGMv2_3207_2_6 4208 4792 + 3.D.6.1.2
TC HRGMv2_3207_2 HRGMv2_3207_2_7 4805 5590 + 3.D.6.1.2
CAZyme HRGMv2_3207_2 HRGMv2_3207_2_8 5804 6799 + GH130_9
Gene ID: HRGMv2_3207_2_2
Type: TC
Location: 531 - 1856 (+)
Gene ID: HRGMv2_3207_2_3
Type: TC
Location: 1853 - 2782 (+)
Gene ID: HRGMv2_3207_2_4
Type: pfam
Location: 2775 - 3491 (+)
Gene ID: HRGMv2_3207_2_5
Type: TC
Location: 3484 - 4215 (+)
Gene ID: HRGMv2_3207_2_6
Type: TC
Location: 4208 - 4792 (+)
Gene ID: HRGMv2_3207_2_7
Type: TC
Location: 4805 - 5590 (+)
Gene ID: HRGMv2_3207_2_8
Type: CAZyme
Location: 5804 - 6799 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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