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Cluster: HRGMv2_3207_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3207_27 HRGMv2_3207_27_2 559 1308 - 3.A.1.3.14
TC HRGMv2_3207_27 HRGMv2_3207_27_3 1323 1976 - 3.A.1.3.12
STP HRGMv2_3207_27 HRGMv2_3207_27_4 2074 2871 - SBP_bac_3
pfam HRGMv2_3207_27 HRGMv2_3207_27_5 3596 4846 - WsaF_N | WsaF_C
CAZyme HRGMv2_3207_27 HRGMv2_3207_27_6 4843 6699 - GT2 | GT2
TC HRGMv2_3207_27 HRGMv2_3207_27_7 6762 7505 - 3.A.1.103.1
TC HRGMv2_3207_27 HRGMv2_3207_27_8 7521 8309 - 3.A.1.103.6
TC HRGMv2_3207_27 HRGMv2_3207_27_9 8601 10964 - 9.A.8.1.6
TC HRGMv2_3207_27 HRGMv2_3207_27_10 11610 13526 - 3.A.1.135.5
TC HRGMv2_3207_27 HRGMv2_3207_27_11 13513 15264 - 3.A.1.135.5
pfam HRGMv2_3207_27 HRGMv2_3207_27_12 15331 16218 - NTP_transferase
TC HRGMv2_3207_27 HRGMv2_3207_27_13 16211 17578 - 9.B.18.1.3
NULL(UNKNOWN) HRGMv2_3207_27 HRGMv2_3207_27_14 17931 18398 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3207_27 HRGMv2_3207_27_15 18498 20720 - GH78
Gene ID: HRGMv2_3207_27_2
Type: TC
Location: 559 - 1308 (-)
Gene ID: HRGMv2_3207_27_3
Type: TC
Location: 1323 - 1976 (-)
Gene ID: HRGMv2_3207_27_4
Type: STP
Location: 2074 - 2871 (-)
Gene ID: HRGMv2_3207_27_5
Type: pfam
Location: 3596 - 4846 (-)
Gene ID: HRGMv2_3207_27_6
Type: CAZyme
Location: 4843 - 6699 (-)
Gene ID: HRGMv2_3207_27_7
Type: TC
Location: 6762 - 7505 (-)
Gene ID: HRGMv2_3207_27_8
Type: TC
Location: 7521 - 8309 (-)
Gene ID: HRGMv2_3207_27_9
Type: TC
Location: 8601 - 10964 (-)
Gene ID: HRGMv2_3207_27_10
Type: TC
Location: 11610 - 13526 (-)
Gene ID: HRGMv2_3207_27_11
Type: TC
Location: 13513 - 15264 (-)
Gene ID: HRGMv2_3207_27_12
Type: pfam
Location: 15331 - 16218 (-)
Gene ID: HRGMv2_3207_27_13
Type: TC
Location: 16211 - 17578 (-)
Gene ID: HRGMv2_3207_27_14
Type:
Location: 17931 - 18398 (+)
Gene ID: HRGMv2_3207_27_15
Type: CAZyme
Location: 18498 - 20720 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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