Cluster: HRGMv2_3207_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3207
- CGC Family ID: CGCFAM_09041
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3207_25 | HRGMv2_3207_25_5 | 6763 | 7674 | + | 3.A.1.1.4 |
| TC | HRGMv2_3207_25 | HRGMv2_3207_25_6 | 7688 | 8599 | + | 3.A.1.1.36 |
| pfam | HRGMv2_3207_25 | HRGMv2_3207_25_7 | 8613 | 10784 | + | Yip1 |
| pfam | HRGMv2_3207_25 | HRGMv2_3207_25_8 | 10800 | 13088 | + | DUF5696 |
| TC | HRGMv2_3207_25 | HRGMv2_3207_25_9 | 13085 | 14002 | + | 3.A.1.1.20 |
| TC | HRGMv2_3207_25 | HRGMv2_3207_25_10 | 14018 | 15022 | + | 3.A.1.1.11 |
| CAZyme | HRGMv2_3207_25 | HRGMv2_3207_25_11 | 15263 | 17890 | - | GH3 |
Gene ID: HRGMv2_3207_25_5
Type: TC
Location: 6763 - 7674 (+)
Type: TC
Location: 6763 - 7674 (+)
Gene ID: HRGMv2_3207_25_6
Type: TC
Location: 7688 - 8599 (+)
Type: TC
Location: 7688 - 8599 (+)
Gene ID: HRGMv2_3207_25_7
Type: pfam
Location: 8613 - 10784 (+)
Type: pfam
Location: 8613 - 10784 (+)
Gene ID: HRGMv2_3207_25_8
Type: pfam
Location: 10800 - 13088 (+)
Type: pfam
Location: 10800 - 13088 (+)
Gene ID: HRGMv2_3207_25_9
Type: TC
Location: 13085 - 14002 (+)
Type: TC
Location: 13085 - 14002 (+)
Gene ID: HRGMv2_3207_25_10
Type: TC
Location: 14018 - 15022 (+)
Type: TC
Location: 14018 - 15022 (+)
Gene ID: HRGMv2_3207_25_11
Type: CAZyme
Location: 15263 - 17890 (-)
Type: CAZyme
Location: 15263 - 17890 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
SIG607
Species
SIG607 sp934476025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.