Cluster: HRGMv2_3206_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3206
- CGC Family ID: CGCFAM_00849
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3206_3 | HRGMv2_3206_3_25 | 28412 | 29107 | - | 3.A.1.132.6 |
| TF | HRGMv2_3206_3 | HRGMv2_3206_3_26 | 29118 | 29477 | - | GntR |
| peptidase | HRGMv2_3206_3 | HRGMv2_3206_3_27 | 29673 | 30878 | + | M20.UPW |
| CAZyme | HRGMv2_3206_3 | HRGMv2_3206_3_28 | 30959 | 31903 | + | CE4 |
Gene ID: HRGMv2_3206_3_25
Type: TC
Location: 28412 - 29107 (-)
Type: TC
Location: 28412 - 29107 (-)
Gene ID: HRGMv2_3206_3_26
Type: TF
Location: 29118 - 29477 (-)
Type: TF
Location: 29118 - 29477 (-)
Gene ID: HRGMv2_3206_3_27
Type: peptidase
Location: 29673 - 30878 (+)
Type: peptidase
Location: 29673 - 30878 (+)
Gene ID: HRGMv2_3206_3_28
Type: CAZyme
Location: 30959 - 31903 (+)
Type: CAZyme
Location: 30959 - 31903 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Feifaniaceae
Genus
Galloscillospira_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.