Cluster: HRGMv2_3205_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3205
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3205_10 | HRGMv2_3205_10_4 | 3778 | 5709 | - | GT39 |
| pfam | HRGMv2_3205_10 | HRGMv2_3205_10_5 | 5825 | 6790 | - | PseudoU_synth_2 | S4 |
| TC | HRGMv2_3205_10 | HRGMv2_3205_10_6 | 6824 | 8179 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_3205_10_4
Type: CAZyme
Location: 3778 - 5709 (-)
Type: CAZyme
Location: 3778 - 5709 (-)
Gene ID: HRGMv2_3205_10_5
Type: pfam
Location: 5825 - 6790 (-)
Type: pfam
Location: 5825 - 6790 (-)
Gene ID: HRGMv2_3205_10_6
Type: TC
Location: 6824 - 8179 (-)
Type: TC
Location: 6824 - 8179 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.