Cluster: HRGMv2_3205_CGC3
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3205
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3205_3 | HRGMv2_3205_3_51 | 56163 | 57230 | - | GT4 |
| TC | HRGMv2_3205_3 | HRGMv2_3205_3_52 | 57227 | 58345 | - | 2.A.120.1.2 |
| NULL(UNKNOWN) | HRGMv2_3205_3 | HRGMv2_3205_3_53 | 58362 | 59498 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3205_3 | HRGMv2_3205_3_54 | 59500 | 60216 | - | DUF2334 |
| CAZyme | HRGMv2_3205_3 | HRGMv2_3205_3_55 | 60213 | 61340 | - | GT4 |
| pfam | HRGMv2_3205_3 | HRGMv2_3205_3_56 | 61312 | 61890 | - | Hexapep | Hexapep_2 |
| CAZyme | HRGMv2_3205_3 | HRGMv2_3205_3_57 | 61887 | 62984 | - | GT4 |
| TC | HRGMv2_3205_3 | HRGMv2_3205_3_58 | 63119 | 63856 | - | 9.B.18.1.3 |
| TF | HRGMv2_3205_3 | HRGMv2_3205_3_59 | 64327 | 65268 | - | HTH_1 |
| STP | HRGMv2_3205_3 | HRGMv2_3205_3_60 | 65458 | 67077 | + | Pyr_redox_2 |
| TC | HRGMv2_3205_3 | HRGMv2_3205_3_61 | 67291 | 69000 | + | 3.A.1.1.10 |
Gene ID: HRGMv2_3205_3_51
Type: CAZyme
Location: 56163 - 57230 (-)
Type: CAZyme
Location: 56163 - 57230 (-)
Gene ID: HRGMv2_3205_3_52
Type: TC
Location: 57227 - 58345 (-)
Type: TC
Location: 57227 - 58345 (-)
Gene ID: HRGMv2_3205_3_53
Type:
Location: 58362 - 59498 (-)
Type:
Location: 58362 - 59498 (-)
Gene ID: HRGMv2_3205_3_54
Type: pfam
Location: 59500 - 60216 (-)
Type: pfam
Location: 59500 - 60216 (-)
Gene ID: HRGMv2_3205_3_55
Type: CAZyme
Location: 60213 - 61340 (-)
Type: CAZyme
Location: 60213 - 61340 (-)
Gene ID: HRGMv2_3205_3_56
Type: pfam
Location: 61312 - 61890 (-)
Type: pfam
Location: 61312 - 61890 (-)
Gene ID: HRGMv2_3205_3_57
Type: CAZyme
Location: 61887 - 62984 (-)
Type: CAZyme
Location: 61887 - 62984 (-)
Gene ID: HRGMv2_3205_3_58
Type: TC
Location: 63119 - 63856 (-)
Type: TC
Location: 63119 - 63856 (-)
Gene ID: HRGMv2_3205_3_59
Type: TF
Location: 64327 - 65268 (-)
Type: TF
Location: 64327 - 65268 (-)
Gene ID: HRGMv2_3205_3_60
Type: STP
Location: 65458 - 67077 (+)
Type: STP
Location: 65458 - 67077 (+)
Gene ID: HRGMv2_3205_3_61
Type: TC
Location: 67291 - 69000 (+)
Type: TC
Location: 67291 - 69000 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.