Cluster: HRGMv2_3205_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_3205
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3205_79 | HRGMv2_3205_79_4 | 2742 | 5177 | - | GT35 |
| CAZyme | HRGMv2_3205_79 | HRGMv2_3205_79_5 | 5194 | 7104 | - | GH13_9 |
| pfam | HRGMv2_3205_79 | HRGMv2_3205_79_6 | 7305 | 7709 | + | 4HBT | 4HBT_3 |
| TC | HRGMv2_3205_79 | HRGMv2_3205_79_7 | 7753 | 8649 | - | 2.A.7.3.53 |
Gene ID: HRGMv2_3205_79_4
Type: CAZyme
Location: 2742 - 5177 (-)
Type: CAZyme
Location: 2742 - 5177 (-)
Gene ID: HRGMv2_3205_79_5
Type: CAZyme
Location: 5194 - 7104 (-)
Type: CAZyme
Location: 5194 - 7104 (-)
Gene ID: HRGMv2_3205_79_6
Type: pfam
Location: 7305 - 7709 (+)
Type: pfam
Location: 7305 - 7709 (+)
Gene ID: HRGMv2_3205_79_7
Type: TC
Location: 7753 - 8649 (-)
Type: TC
Location: 7753 - 8649 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.