Cluster: HRGMv2_3205_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3205
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3205_51 | HRGMv2_3205_51_5 | 3978 | 5102 | - | GT28 |
| TC | HRGMv2_3205_51 | HRGMv2_3205_51_6 | 5198 | 6322 | - | 2.A.103.1.3 |
| TC | HRGMv2_3205_51 | HRGMv2_3205_51_7 | 6340 | 7317 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_3205_51_5
Type: CAZyme
Location: 3978 - 5102 (-)
Type: CAZyme
Location: 3978 - 5102 (-)
Gene ID: HRGMv2_3205_51_6
Type: TC
Location: 5198 - 6322 (-)
Type: TC
Location: 5198 - 6322 (-)
Gene ID: HRGMv2_3205_51_7
Type: TC
Location: 6340 - 7317 (-)
Type: TC
Location: 6340 - 7317 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3205_51_6 | vegetarian > vegan | 2.11764 | 0.00037 |
| HRGMv2_3205_51_7 | vegetarian > vegan | 2.62373 | 0.00037 |