Cluster: HRGMv2_3205_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3205
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3205_36 | HRGMv2_3205_36_6 | 6075 | 7439 | + | 1.A.26.1.2 |
| NULL(UNKNOWN) | HRGMv2_3205_36 | HRGMv2_3205_36_7 | 7587 | 7829 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_3205_36 | HRGMv2_3205_36_8 | 8103 | 9650 | + | HD |
| CAZyme | HRGMv2_3205_36 | HRGMv2_3205_36_9 | 9709 | 12639 | - | GH106 |
Gene ID: HRGMv2_3205_36_6
Type: TC
Location: 6075 - 7439 (+)
Type: TC
Location: 6075 - 7439 (+)
Gene ID: HRGMv2_3205_36_7
Type:
Location: 7587 - 7829 (+)
Type:
Location: 7587 - 7829 (+)
Gene ID: HRGMv2_3205_36_8
Type: STP
Location: 8103 - 9650 (+)
Type: STP
Location: 8103 - 9650 (+)
Gene ID: HRGMv2_3205_36_9
Type: CAZyme
Location: 9709 - 12639 (-)
Type: CAZyme
Location: 9709 - 12639 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
HGM13006
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3205_36_8 | vegetarian > vegan | 1.25940 | 0.00037 |