Cluster: HRGMv2_3204_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3204
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3204_6 | HRGMv2_3204_6_122 | 133043 | 135382 | - | GH31_3 |
| STP | HRGMv2_3204_6 | HRGMv2_3204_6_123 | 135643 | 136179 | + | Nitroreductase |
| CAZyme | HRGMv2_3204_6 | HRGMv2_3204_6_124 | 136225 | 137289 | - | GH26 |
| pfam | HRGMv2_3204_6 | HRGMv2_3204_6_125 | 137561 | 137989 | + | 4HBT | 4HBT_2 |
| TF | HRGMv2_3204_6 | HRGMv2_3204_6_126 | 138014 | 138553 | - | SpoVT_AbrB |
| CAZyme | HRGMv2_3204_6 | HRGMv2_3204_6_127 | 138720 | 140720 | - | CBM65 | CBM65 | GH5_4 |
| TC | HRGMv2_3204_6 | HRGMv2_3204_6_128 | 141113 | 143326 | - | 8.A.7.1.5 |
Gene ID: HRGMv2_3204_6_122
Type: CAZyme
Location: 133043 - 135382 (-)
Type: CAZyme
Location: 133043 - 135382 (-)
Gene ID: HRGMv2_3204_6_123
Type: STP
Location: 135643 - 136179 (+)
Type: STP
Location: 135643 - 136179 (+)
Gene ID: HRGMv2_3204_6_124
Type: CAZyme
Location: 136225 - 137289 (-)
Type: CAZyme
Location: 136225 - 137289 (-)
Gene ID: HRGMv2_3204_6_125
Type: pfam
Location: 137561 - 137989 (+)
Type: pfam
Location: 137561 - 137989 (+)
Gene ID: HRGMv2_3204_6_126
Type: TF
Location: 138014 - 138553 (-)
Type: TF
Location: 138014 - 138553 (-)
Gene ID: HRGMv2_3204_6_127
Type: CAZyme
Location: 138720 - 140720 (-)
Type: CAZyme
Location: 138720 - 140720 (-)
Gene ID: HRGMv2_3204_6_128
Type: TC
Location: 141113 - 143326 (-)
Type: TC
Location: 141113 - 143326 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.