Cluster: HRGMv2_3204_CGC8
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3204
- CGC Family ID: CGCFAM_00126
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3204_4 | HRGMv2_3204_4_54 | 57352 | 59358 | + | 9.A.8.1.6 |
| pfam | HRGMv2_3204_4 | HRGMv2_3204_4_55 | 59552 | 60652 | - | GLF | NAD_binding_8 |
| STP | HRGMv2_3204_4 | HRGMv2_3204_4_56 | 60663 | 63113 | - | Fer4 |
| CAZyme | HRGMv2_3204_4 | HRGMv2_3204_4_57 | 63110 | 64951 | - | GT2 |
| TC | HRGMv2_3204_4 | HRGMv2_3204_4_58 | 65005 | 65748 | - | 3.A.1.103.1 |
| TC | HRGMv2_3204_4 | HRGMv2_3204_4_59 | 65770 | 66579 | - | 3.A.1.103.1 |
| CAZyme | HRGMv2_3204_4 | HRGMv2_3204_4_60 | 66595 | 67620 | - | GT2 |
| CAZyme | HRGMv2_3204_4 | HRGMv2_3204_4_61 | 67613 | 68416 | - | GT2 |
| CAZyme | HRGMv2_3204_4 | HRGMv2_3204_4_62 | 68680 | 69975 | - | CE17 |
Gene ID: HRGMv2_3204_4_54
Type: TC
Location: 57352 - 59358 (+)
Type: TC
Location: 57352 - 59358 (+)
Gene ID: HRGMv2_3204_4_55
Type: pfam
Location: 59552 - 60652 (-)
Type: pfam
Location: 59552 - 60652 (-)
Gene ID: HRGMv2_3204_4_56
Type: STP
Location: 60663 - 63113 (-)
Type: STP
Location: 60663 - 63113 (-)
Gene ID: HRGMv2_3204_4_57
Type: CAZyme
Location: 63110 - 64951 (-)
Type: CAZyme
Location: 63110 - 64951 (-)
Gene ID: HRGMv2_3204_4_58
Type: TC
Location: 65005 - 65748 (-)
Type: TC
Location: 65005 - 65748 (-)
Gene ID: HRGMv2_3204_4_59
Type: TC
Location: 65770 - 66579 (-)
Type: TC
Location: 65770 - 66579 (-)
Gene ID: HRGMv2_3204_4_60
Type: CAZyme
Location: 66595 - 67620 (-)
Type: CAZyme
Location: 66595 - 67620 (-)
Gene ID: HRGMv2_3204_4_61
Type: CAZyme
Location: 67613 - 68416 (-)
Type: CAZyme
Location: 67613 - 68416 (-)
Gene ID: HRGMv2_3204_4_62
Type: CAZyme
Location: 68680 - 69975 (-)
Type: CAZyme
Location: 68680 - 69975 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.