Cluster: HRGMv2_3204_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3204
- CGC Family ID: CGCFAM_00189
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3204_2 | HRGMv2_3204_2_11 | 14217 | 15461 | - | GT4 |
| pfam | HRGMv2_3204_2 | HRGMv2_3204_2_12 | 15712 | 16449 | - | CpsB_CapC |
| TC | HRGMv2_3204_2 | HRGMv2_3204_2_13 | 16475 | 17932 | - | 8.A.3.3.4 |
Gene ID: HRGMv2_3204_2_11
Type: CAZyme
Location: 14217 - 15461 (-)
Type: CAZyme
Location: 14217 - 15461 (-)
Gene ID: HRGMv2_3204_2_12
Type: pfam
Location: 15712 - 16449 (-)
Type: pfam
Location: 15712 - 16449 (-)
Gene ID: HRGMv2_3204_2_13
Type: TC
Location: 16475 - 17932 (-)
Type: TC
Location: 16475 - 17932 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.