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Cluster: HRGMv2_3204_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3204_34 HRGMv2_3204_34_2 1357 2052 + 3.A.2.1.5
TC HRGMv2_3204_34 HRGMv2_3204_34_3 2101 2319 + 3.A.2.1.2
TC HRGMv2_3204_34 HRGMv2_3204_34_4 2367 2585 + 3.A.2.1.2
pfam HRGMv2_3204_34 HRGMv2_3204_34_5 2617 3102 + ATP-synt_B
pfam HRGMv2_3204_34 HRGMv2_3204_34_6 3099 3605 + OSCP
TC HRGMv2_3204_34 HRGMv2_3204_34_7 3611 5122 + 3.A.2.1.5
TC HRGMv2_3204_34 HRGMv2_3204_34_8 5136 6014 + 3.A.2.1.5
TC HRGMv2_3204_34 HRGMv2_3204_34_9 6034 7431 + 3.A.2.1.5
pfam HRGMv2_3204_34 HRGMv2_3204_34_10 7434 7859 + ATP-synt_DE | ATP-synt_DE_N
CAZyme HRGMv2_3204_34 HRGMv2_3204_34_11 7900 10344 - GH2
Gene ID: HRGMv2_3204_34_2
Type: TC
Location: 1357 - 2052 (+)
Gene ID: HRGMv2_3204_34_3
Type: TC
Location: 2101 - 2319 (+)
Gene ID: HRGMv2_3204_34_4
Type: TC
Location: 2367 - 2585 (+)
Gene ID: HRGMv2_3204_34_5
Type: pfam
Location: 2617 - 3102 (+)
Gene ID: HRGMv2_3204_34_6
Type: pfam
Location: 3099 - 3605 (+)
Gene ID: HRGMv2_3204_34_7
Type: TC
Location: 3611 - 5122 (+)
Gene ID: HRGMv2_3204_34_8
Type: TC
Location: 5136 - 6014 (+)
Gene ID: HRGMv2_3204_34_9
Type: TC
Location: 6034 - 7431 (+)
Gene ID: HRGMv2_3204_34_10
Type: pfam
Location: 7434 - 7859 (+)
Gene ID: HRGMv2_3204_34_11
Type: CAZyme
Location: 7900 - 10344 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Hominimerdicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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