Cluster: HRGMv2_3204_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3204
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3204_33 | HRGMv2_3204_33_5 | 2632 | 3162 | - | 3.A.1.26.5 |
| pfam | HRGMv2_3204_33 | HRGMv2_3204_33_6 | 3186 | 4526 | - | ThiC_Rad_SAM |
| STP | HRGMv2_3204_33 | HRGMv2_3204_33_7 | 4528 | 5328 | - | PfkB |
| TC | HRGMv2_3204_33 | HRGMv2_3204_33_8 | 5698 | 6486 | + | 2.A.5.5.2 |
| pfam | HRGMv2_3204_33 | HRGMv2_3204_33_9 | 6547 | 7536 | - | Asparaginase |
| CAZyme | HRGMv2_3204_33 | HRGMv2_3204_33_10 | 7865 | 9175 | + | GH13_20 |
Gene ID: HRGMv2_3204_33_5
Type: TC
Location: 2632 - 3162 (-)
Type: TC
Location: 2632 - 3162 (-)
Gene ID: HRGMv2_3204_33_6
Type: pfam
Location: 3186 - 4526 (-)
Type: pfam
Location: 3186 - 4526 (-)
Gene ID: HRGMv2_3204_33_7
Type: STP
Location: 4528 - 5328 (-)
Type: STP
Location: 4528 - 5328 (-)
Gene ID: HRGMv2_3204_33_8
Type: TC
Location: 5698 - 6486 (+)
Type: TC
Location: 5698 - 6486 (+)
Gene ID: HRGMv2_3204_33_9
Type: pfam
Location: 6547 - 7536 (-)
Type: pfam
Location: 6547 - 7536 (-)
Gene ID: HRGMv2_3204_33_10
Type: CAZyme
Location: 7865 - 9175 (+)
Type: CAZyme
Location: 7865 - 9175 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.