Cluster: HRGMv2_3204_CGC18
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3204
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3204_19 | HRGMv2_3204_19_24 | 31632 | 32414 | - | 2.A.5.5.2 |
| STP | HRGMv2_3204_19 | HRGMv2_3204_19_25 | 32424 | 32681 | - | HMA |
| CAZyme | HRGMv2_3204_19 | HRGMv2_3204_19_26 | 32806 | 35040 | - | GH5_4 |
| CAZyme | HRGMv2_3204_19 | HRGMv2_3204_19_27 | 35353 | 38463 | - | CBM23 | CBM46 | GH5_7 |
Gene ID: HRGMv2_3204_19_24
Type: TC
Location: 31632 - 32414 (-)
Type: TC
Location: 31632 - 32414 (-)
Gene ID: HRGMv2_3204_19_25
Type: STP
Location: 32424 - 32681 (-)
Type: STP
Location: 32424 - 32681 (-)
Gene ID: HRGMv2_3204_19_26
Type: CAZyme
Location: 32806 - 35040 (-)
Type: CAZyme
Location: 32806 - 35040 (-)
Gene ID: HRGMv2_3204_19_27
Type: CAZyme
Location: 35353 - 38463 (-)
Type: CAZyme
Location: 35353 - 38463 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.