Cluster: HRGMv2_3204_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3204
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3204_19 | HRGMv2_3204_19_16 | 20150 | 21265 | - | CBM35inCE17 | CE17 |
| STP | HRGMv2_3204_19 | HRGMv2_3204_19_17 | 21476 | 22669 | + | AAA |
| TC | HRGMv2_3204_19 | HRGMv2_3204_19_18 | 22747 | 23628 | - | 3.A.1.1.47 |
| TC | HRGMv2_3204_19 | HRGMv2_3204_19_19 | 23642 | 24619 | - | 3.A.1.1.23 |
Gene ID: HRGMv2_3204_19_16
Type: CAZyme
Location: 20150 - 21265 (-)
Type: CAZyme
Location: 20150 - 21265 (-)
Gene ID: HRGMv2_3204_19_17
Type: STP
Location: 21476 - 22669 (+)
Type: STP
Location: 21476 - 22669 (+)
Gene ID: HRGMv2_3204_19_18
Type: TC
Location: 22747 - 23628 (-)
Type: TC
Location: 22747 - 23628 (-)
Gene ID: HRGMv2_3204_19_19
Type: TC
Location: 23642 - 24619 (-)
Type: TC
Location: 23642 - 24619 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.