Cluster: HRGMv2_3204_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3204
- CGC Family ID: CGCFAM_10276
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3204_14 | HRGMv2_3204_14_45 | 40080 | 41618 | - | GH13_44 |
| STP | HRGMv2_3204_14 | HRGMv2_3204_14_46 | 41838 | 42830 | + | SBP_bac_3 |
| TC | HRGMv2_3204_14 | HRGMv2_3204_14_47 | 42845 | 44038 | + | 2.A.27.1.1 |
Gene ID: HRGMv2_3204_14_45
Type: CAZyme
Location: 40080 - 41618 (-)
Type: CAZyme
Location: 40080 - 41618 (-)
Gene ID: HRGMv2_3204_14_46
Type: STP
Location: 41838 - 42830 (+)
Type: STP
Location: 41838 - 42830 (+)
Gene ID: HRGMv2_3204_14_47
Type: TC
Location: 42845 - 44038 (+)
Type: TC
Location: 42845 - 44038 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Hominimerdicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.